BLOSpectrum tools

These tools work with fasta file.The databases and sequences must be in fasta format.

Example of a database in fasta format:

>d2e1ea1 a.60.8.1 (A:1142-1235) Werner syndrome ATP-dependent helicase, WRN {Human (Homo sapiens) [TaxId: 9606]}
qpvisaqeqetqivlygklvearqkhankmdvppailatnkilvdmakmrpttvenvkri
dgvsegkaamlapllevikhfcqtnsvqtdlfss
>d2e1fa1 a.60.8.1 (A:1142-1235) Werner syndrome ATP-dependent helicase, WRN {Human (Homo sapiens) [TaxId: 9606]}
qpvisaqeqetqivlygklvearqkhankmdvppailatnkilvdmakmrpttvenvkri
dgvsegkaamlapllevikhfcqtnsvqtdlfss
>d1go3f_ a.60.8.2 (F:) RNA polymerase II subunit RBP4 (RpoF) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
migkkilgeryvtvseaaeimynraqigelsyeqgcaldylqkfakldkeeakklveeli
slgidektavkiadilpedlddlraiyykrelpenaeeileivrkyi
>d1go3n_ a.60.8.2 (N:) RNA polymerase II subunit RBP4 (RpoF) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
igkkilgeryvtvseaaeimynraqigelsyeqgcaldylqkfakldkeeakklveelis
lgidektavkiadilpedlddlraiyykrelpenaeeileivrkyi
>d1y14a_ a.60.8.2 (A:) RNA polymerase II subunit RBP4 (RpoF) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
elialnlsearlvikealverrrafkrsqkkhkkkhlkhenandettavededddldedd
vnaddddfmhsetrekelesidvlleqttggnnkdlkntmqyltnfsrfrdqetvgaviq
llkstglhpfevaqlgslacdtadeaktlipslnnkisddelerilkelsnletly
>d1y14c_ a.60.8.2 (C:) RNA polymerase II subunit RBP4 (RpoF) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
elialnlsearlvikealverrrafkrsqkkhkkkhlkhenandettavededddldedd
vnaddddfmhsetrekelesidvlleqttggnnkdlkntmqyltnfsrfrdqetvgaviq
llkstglhpfevaqlgslacdtadeaktlipslnnkisddelerilkelsnletly
>d2c35a1 a.60.8.2 (A:14-142) RNA polymerase II subunit RBP4 (RpoF) {Human (Homo sapiens) [TaxId: 9606]}
eedasqlifpkefetaetllnsevhmllehrkqqnesaedeqelsevfmktlnytarfsr
fknretiasvrslllqkklhkfelaclanlcpetaeeskalipslegrfedeelqqildd
iqtkrsfqy
>d2c35c1 a.60.8.2 (C:14-142) RNA polymerase II subunit RBP4 (RpoF) {Human (Homo sapiens) [TaxId: 9606]}
eedasqlifpkefetaetllnsevhmllehrkqqnesaedeqelsevfmktlnytarfsr
fknretiasvrslllqkklhkfelaclanlcpetaeeskalipslegrfedeelqqildd
iqtkrsfqy
>d2c35e1 a.60.8.2 (E:14-139) RNA polymerase II subunit RBP4 (RpoF) {Human (Homo sapiens) [TaxId: 9606]}
eedasqlifpkefetaetllnsevhmllehrkqqnesaedeqelsevfmktlnytarfsr
fknretiasvrslllqkklhkfelaclanlcpetaeeskalipslegrfedeelqqildd
iqtkrs
>d2c35g1 a.60.8.2 (G:14-139) RNA polymerase II subunit RBP4 (RpoF) {Human (Homo sapiens) [TaxId: 9606]}
eedasqlifpkefetaetllnsevhmllehrkqqnesaedeqelsevfmktlnytarfsr
fknretiasvrslllqkklhkfelaclanlcpetaeeskalipslegrfedeelqqildd
iqtkrs
>d1yt3a1 a.60.8.3 (A:194-294) Ribonuclease D {Escherichia coli [TaxId: 562]}
vapedawrditnawqlrtrqlaclqlladwrlrkarerdlavnfvvreehlwsvarympg
slgeldslglsgseirfhgktllalvekaqtlpedalpqpm
>d1yt3a2 a.60.8.3 (A:295-375) Ribonuclease D {Escherichia coli [TaxId: 562]}
lnlmdmpgyrkafkaikslitdvsethkisaellasrrqinqllnwhwklkpqnnlpeli
sgwrgelmaealhnllqeypq
>d2hbja1 a.60.8.4 (A:421-516) Exosome complex exonuclease RRP6 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
kespwkilmyqynipperevlvrelyqwrdliarrddesprfvmpnqllaalvaytptdv
igvvsltngvtehvrqnakllanlirdalrnikntn
>d2hbka1 a.60.8.4 (A:421-516) Exosome complex exonuclease RRP6 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
kespwkilmyqynipperevlvrelyqwrdliarrddesprfvmpnqllaalvaytptdv
igvvsltngvtehvrqnakllanlirdalrnikntn
>d2hbla1 a.60.8.4 (A:421-516) Exosome complex exonuclease RRP6 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
kespwkilmyqynipperevlvrelyqwrdliarrddesprfvmpnqllaalvaytptdv
igvvsltngvtehvrqnakllanlirdalrnikntn
>d2hbma1 a.60.8.4 (A:421-516) Exosome complex exonuclease RRP6 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
kespwkilmyqynipperevlvrelyqwrdliarrddesprfvmpnqllaalvaytptdv
igvvsltngvtehvrqnakllanlirdalrnikntn
>d2cpra1 a.60.8.4 (A:483-595) Exosome component 10, EXOSC10 {Human (Homo sapiens) [TaxId: 9606]}
kpiftdesylelyrkqkkhlntqqltafqllfawrdktarredesygyvlpnhmmlkiae
elpkepqgiiaccnpvpplvrqqinemhlliqqarempllksevaagvkkssg
>d1crxa1 a.60.9.1 (A:20-129) Cre recombinase {Bacteriophage P1 [TaxId: 10678]}
sdevrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdyllylq
arglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdage
>d1crxb1 a.60.9.1 (B:20-129) Cre recombinase {Bacteriophage P1 [TaxId: 10678]}
sdevrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdyllylq
arglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdage
>d1drga1 a.60.9.1 (A:21-129) Cre recombinase {Bacteriophage P1 [TaxId: 10678]}
devrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdyllylqa
rglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdage
>d1f44a1 a.60.9.1 (A:20-129) Cre recombinase {Bacteriophage P1 [TaxId: 10678]}
sdevrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdyllylq
arglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdage
>d1kbua1 a.60.9.1 (A:18-129) Cre recombinase {Bacteriophage P1 [TaxId: 10678]}
atsdevrknlmdmfrdrqafsehtwkmllsvcrswaawcklnnrkwfpaepedvrdylly
lqarglavktiqqhlgqlnmlhrrsglprpsdsnavslvmrrirkenvdage

Example of a sequence in fasta format: